Information for 3-AAACATAAAAACT (Motif 7)

C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G C T A C G T C G A T A C G T C G T A A C G T A C T G A G C T A C G T A C G T
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 17.9bp
Average Position of motif in Background51.4 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXF2/MA0030.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAACATAAAAACT
CAAACGTAAACAAT
 A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAACATAAAAACT
AAGCCATAAAA---
 A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAACATAAAAACT-
AGAGCCATAAAATTCG
 A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAACATAAAAACT
--AAATAAACA--
 C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAACATAAAAACT
-GTCATAAAAN--
 C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAACATAAAAACT
AAAGTAAACAAAAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACATAAAAACT
-GCAATAAAA---
 C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACATAAAAACT
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAACATAAAAACT
AAACAAACATTC-
 C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AAACATAAAAACT
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T C G T A C G T A C G T A C T G A G T C A A G T C A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T