Information for 3-VTCCTVTAVTTCACAA (Motif 5)

T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G C G A T A C T G C G T A C G T A A C T G A C G T C T G A A G T C C G T A A C T G C T A G C G T A A G T C
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.2 +/- 15.2bp
Average Position of motif in Background47.4 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:VTCCTVTAVTTCACAA
----TCCAATCCACA-
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA-
-----SSAATCCACANN
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:VTCCTVTAVTTCACAA
--ACTACAATTCCC--
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA---
--------CTTCACACCTA
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA---
---------TTCACACCTT
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA---
---------TTMACACCTT
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:VTCCTVTAVTTCACAA--
-------ATTGCACAATA
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA---
------NTTTTCACACCTT
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:VTCCTVTAVTTCACAA--
--------TTTCACACCT
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:VTCCTVTAVTTCACAA-
-------HTTTCCCASG
 T A C G C G A T G A T C A G T C A C G T T A C G A G C T C G T A T A G C A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G