Information for 4-CACAACATTT (Motif 11)

A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T
Reverse Opposite:
G T C A G T C A C G T A C A G T C T A G G C A T A C G T A C T G C G A T A T C G
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.697
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif18.62%
Number of Background Sequences with motif3263.5
Percentage of Background Sequences with motif6.63%
Average Position of motif in Targets49.5 +/- 25.1bp
Average Position of motif in Background49.4 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CACAACATTT--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CACAACATTT-
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACAACATTT--
NNCNNAACAATTNT
 A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACAACATTT
CAAACAACAACACCT
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACAACATTT-
NTTNAGAACAATTA
 A C G T A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACAACATTT---
NNTNANAACAATTNNA
 A C G T A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAACATTT-----
TNCNNAACAATTTTTNC
 A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAACATTT-----
ATAAACAATTAAACA
 A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CACAACATTT
--NAACAAT-
 A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACAACATTT
ATCACCCCAT--
 A C G T A C G T A T G C G C T A T G A C G T C A C G T A G A T C G T C A G C A T C A G T C A G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T