Information for 8-ACAGAVAACTGKCTGG (Motif 10)

C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C G C T A T A C G T G A C G T A C G C T A A C T G C G A T A C G T A G C T A C G T A T G C G A C T A C T G A C G T
p-value:1e-13
log p-value:-3.063e+01
Information Content per bp:1.693
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 17.6bp
Average Position of motif in Background41.0 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG
--------CTGTCTGG
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACAGAVAACTGKCTGG-----
----NNTNNTGTCTGGNNTNG
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG
----CCAACTGCCA--
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG
--------TWGTCTGV
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAVAACTGKCTGG
NNNNTGAGCACTGTNNG-
 A C G T A C G T C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG
------VBSYGTCTGG
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ACAGAVAACTGKCTGG-----
----NAGANTGGCGGGGNGNA
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ACAGAVAACTGKCTGG
----CCAACTGCCA--
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG---
---------GGTCTGGCAT
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACAGAVAACTGKCTGG-
-CGACCAACTGCCATGC
 C G T A T G A C C G T A A T C G C G T A T C A G G T C A C G T A T A G C C G A T A C T G A C T G A T G C C G A T A C T G C T A G A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C