Information for 5-CCTCCGGGAAGAG (Motif 6)

A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
Reverse Opposite:
A T G C C A G T A T G C A G C T A C G T A G T C T A G C A T G C T A C G A T C G C G T A C T A G C T A G
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.738
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif484.6
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets49.5 +/- 27.3bp
Average Position of motif in Background49.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTCCGGGAAGAG
CTTCCNGGAA---
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCGGGAAGAG
NCTTCCNGGAAGNN
 A C G T A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCTCCGGGAAGAG--
----CCGGAAGTGGC
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTCCGGGAAGAG
NTTTCCNGGAAA--
 A C G T A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTCCGGGAAGAG-
---NCCGGAAGTGG
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G A C G T
A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCTCCGGGAAGAG--
-----TGGAACAGMA
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCCGGGAAGAG
CTTCTGGGAAA--
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGGGAAGAG
ATTCCCTGAGGGGAA--
 A C G T A C G T A C G T A C G T A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCCGGGAAGAG-
TTTCCAGGAAATGG
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTCCGGGAAGAG
--ACCCGGAAGTA
 A G T C A G T C G A C T T A G C A T G C T A C G A T C G T A C G T G C A T C G A A T C G G T C A A T C G
A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A