Information for 3-AACCTCCAGCTGTCTG (Motif 3)

G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A T G C C G T A A C T G A G T C C G A T C T A G A T C G C G T A A C T G A T C G C G A T A C G T
p-value:1e-15
log p-value:-3.569e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 22.8bp
Average Position of motif in Background38.1 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:9
Orientation:forward strand
Alignment:AACCTCCAGCTGTCTG-
---------CTGTCTGG
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG------
-----NNTNNTGTCTGGNNTNG
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AACCTCCAGCTGTCTG-
-------VBSYGTCTGG
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG
---NNGCAGCTGTT--
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG
---NNGCAGCTGTC--
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG
------CAGCTGTT--
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG
---CAGCAGCTGN---
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:9
Orientation:forward strand
Alignment:AACCTCCAGCTGTCTG-
---------TWGTCTGV
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AACCTCCAGCTGTCTG
-----CCAGCTGTTN-
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AACCTCCAGCTGTCTG-
----TGCAGCTGTCCCT
 G T C A C G T A A T G C A G T C C G A T A T G C A G T C C G T A A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T