Information for 5-KGCAGCTGYG (Motif 4)

C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
Reverse Opposite:
T A G C C T G A A G T C C G T A A C T G G T A C G C A T A C T G A T G C G T C A
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.713
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif38.50%
Number of Background Sequences with motif7677.1
Percentage of Background Sequences with motif16.98%
Average Position of motif in Targets48.9 +/- 25.3bp
Average Position of motif in Background49.4 +/- 40.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-KGCAGCTGYG
NNGCAGCTGTC
 A C G T C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-KGCAGCTGYG
NNGCAGCTGTT
 A C G T C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:KGCAGCTGYG-
-GCAGCTGTNN
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:KGCAGCTGYG---
TGCAGCTGTCCCT
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-KGCAGCTGYG
CAGCAGCTGN-
 A C G T C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--KGCAGCTGYG
NNAGCAGCTGCT
 A C G T A C G T C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:KGCAGCTGYG--
NVCAGCTGBBNN
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:KGCAGCTGYG
CGCAGCTGCG
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:KGCAGCTGYG
--CAGCTGTT
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:KGCAGCTGYG
AGCAGCTGCT
 C A G T A T C G G T A C C G T A A C T G A G T C A C G T A C T G G A C T A T C G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T