Information for 10-AGASAGGRAGGAA (Motif 11)

C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
Reverse Opposite:
A G C T C G A T G A T C G T A C A C G T G A C T G A T C A G T C A G C T T A G C A G C T A G T C C G A T
p-value:1e-7
log p-value:-1.660e+01
Information Content per bp:1.608
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif7.51%
Number of Background Sequences with motif622.3
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets56.8 +/- 22.5bp
Average Position of motif in Background49.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGASAGGRAGGAA--
GGAAGGAAGGAAGGAAGG
 A C G T A C G T A C G T C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGASAGGRAGGAA
AAAAAGAGGAAGTA-
 A C G T A C G T C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGASAGGRAGGAA
ANAGATAAGAA----
 A C G T A C G T C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGASAGGRAGGAA----
-----NDCAGGAARTNN
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGASAGGRAGGAA
-AACAGGAAGT--
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGASAGGRAGGAA-
AAACAGACAAAGGAAT
 A C G T A C G T C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGASAGGRAGGAA
AGAAACGAAAGT-
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGASAGGRAGGAA
--ACAGGAAGTG-
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGASAGGRAGGAA
--AGAGGAAGTG-
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGASAGGRAGGAA
------AGAGGAA
 C G T A T C A G C T G A A T C G C T G A T C A G C T A G C T G A T G C A C A T G C T A G G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A