Information for 10-ATTGAGTGAT (Motif 10)

T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T
Reverse Opposite:
T G C A A G C T A G T C C G T A A G T C A G C T T G A C C G T A C G T A A G C T
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.840
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif106.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets47.3 +/- 22.9bp
Average Position of motif in Background50.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ATTGAGTGAT--
TTTGATTGATGN
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATTGAGTGAT-
CTTGAGTGGCT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATTGAGTGAT
ATGGGGTGAT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATTGAGTGAT-
-TTRAGTGSYK
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATTGAGTGAT-
-TTGAGTGSTT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTGAGTGAT
GTGGGGTGAT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATTGAGTGAT
ATGGGGTGAT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGTGAT----
NNANTGATTGATNTTN
 A C G T A C G T T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTGAGTGAT
BTBRAGTGSN
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTGAGTGAT-
-TTAAGTGCTT
 T C G A A C G T A C G T A C T G C T G A T C A G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T