p-value: | 1e-10 |
log p-value: | -2.447e+01 |
Information Content per bp: | 1.886 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.75% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 33.5 +/- 20.6bp |
Average Position of motif in Background | 60.7 +/- 18.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0048.1_Hoxa13/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTCWWGTARAAT-- AAACCTCGTAAAATTT |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACTCWWGTARAAT --GCTCGTAAAAA |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACTCWWGTARAAT-- AAAGCTCGTAAAATTT |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACTCWWGTARAAT --NCYAATAAAA- |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACTCWWGTARAAT--- CTACCAATAAAATTCT |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------ACTCWWGTARAAT NGTGTTCAVTSAAGCGKAAA |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACTCWWGTARAAT --CCYMATAAAA- |
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PH0057.1_Hoxb13/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACTCWWGTARAAT--- AACCCAATAAAATTCG |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACTCWWGTARAAT AGCCACTCAAG------ |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACTCWWGTARAAT ---CCAATAAAAA |
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