Information for 12-CTTWTTGGCTCCC (Motif 9)

A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G C G T A A C T G A G T C A G T C C G T A C G T A C G A T G T C A C G T A A C T G
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 28.2bp
Average Position of motif in Background54.0 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC
CCGATTGGCT---
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC--
CTGATTGGTCNATTT
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC
-TGATTGGCTANN
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC
---NTTGGCANN-
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CTTWTTGGCTCCC
AGAGTGCTGATTGGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTTWTTGGCTCCC
----TTGGCA---
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTWTTGGCTCCC--
---TTTGGCGCCAAA
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CTTWTTGGCTCCC
-------GCTCCG
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC----
NNNNTTGGCGCCGANNN
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTWTTGGCTCCC----
NNNNTTGGCGCCGANNN
 A G T C A C G T A C G T G C A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T