Information for 8-TGGCCCTGTGCAA (Motif 5)

A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G A T G C C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C C G T A
p-value:1e-13
log p-value:-3.152e+01
Information Content per bp:1.929
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 27.7bp
Average Position of motif in Background15.5 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCCTGTGCAA
TTGGCATGGTGCCA
 A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGGCCCTGTGCAA---
GGGCCGTGTGCAAAAA
 A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGCCCTGTGCAA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTGTGCAA-
GTGCCGTGTGCAAA
 A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCCCTGTGCAA
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCCTGTGCAA
BNTGDCCTTG-----
 A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGCCCTGTGCAA
----GCTGTG---
 A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCCTGTGCAA
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGGCCCTGTGCAA----
-----AGATGCAATCCC
 A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGCCCTGTGCAA
TTGGCA--------
 A C G T A C G T A C T G A C T G A G T C G T A C A G T C A C G T T C A G A C G T A T C G A G T C C G T A C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T