Information for 4-AGRCWCTSYSKGGYWT (Motif 6)

C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A C T A G A T G C A G T C G T C A T A C G C T G A A T C G C G T A C T A G G C T A A C T G A G C T A G T C C G A T
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 14.8bp
Average Position of motif in Background38.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGRCWCTSYSKGGYWT
-----GTCTGTGGTTT
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGRCWCTSYSKGGYWT
-ACCACTCTCGGTCAC
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGRCWCTSYSKGGYWT
------GGTCTGGCAT
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ELF4/MA0641.1/Jaspar

Match Rank:4
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGRCWCTSYSKGGYWT
---CACTTCCGGGTT-
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T A C G T G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGRCWCTSYSKGGYWT
BCAGACWA----------
 A C G T A C G T C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGRCWCTSYSKGGYWT
--ACATGCCCGGGCAT
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGRCWCTSYSKGGYWT
------NNTGTGGTTT
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

ELF1/MA0473.2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGRCWCTSYSKGGYWT
---NACTTCCGGGTT-
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
A C G T A C G T A C G T A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGRCWCTSYSKGGYWT--
-NNTNNTGTCTGGNNTNG
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGRCWCTSYSKGGYWT
NNGCNCTGCGCGGC--
 C G T A A C T G C T G A A G T C C G A T A G T C A C G T A T G C A G C T A T G C A C G T A C T G A T C G A G T C C G A T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T