Information for 5-AGCGCCCCCGGCA (Motif 5)

C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C T A G C A C T G A C T G A C T G A T C G A C T G A G T C A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 27.3bp
Average Position of motif in Background37.4 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCGCCCCCGGCA
--CGCCTCAGGCA
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCGCCCCCGGCA--
ANTGCCTGAGGCAAN
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCGCCCCCGGCA
--AGCCTCAGGCA
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCGCCCCCGGCA
--AGCCTCAGGCA
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCCCGGCA-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCGCCCCCGGCA--
NTNGCCTCAGGCNNN
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCGCCCCCGGCA
-AAGACCCYYN--
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGCCCCCGGCA
NNNGGGGCGCCCCCNN--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCCCCGGCA---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCGCCCCCGGCA--
NTCGCCTCAGGCAAT
 C G T A A C T G A G T C A C T G T A G C A T G C A G T C A G T C G T A C A C T G A C T G A G T C C T G A A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T