Information for 3-AACCACAACC (Motif 2)

G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
Reverse Opposite:
C T A G T C A G G C A T C G A T A T C G C A G T A C T G T A C G A C G T C A G T
p-value:1e-15
log p-value:-3.509e+01
Information Content per bp:1.663
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif1685.5
Percentage of Background Sequences with motif3.49%
Average Position of motif in Targets52.0 +/- 25.8bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AACCACAACC
AAACCACANN-
 A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAACC
AAACCACAGC-
 A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AACCACAACC
NWAACCACADNN
 A C G T A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAACC
AAACCACAGAN
 A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AACCACAACC
NAAACCACAG--
 A C G T A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AACCACAACC
AAACCGCAA--
 A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AACCACAACC
AAACCGCAAA-
 A C G T G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AACCACAACC---
-ACCACATCCTGT
 G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C A C G T A C G T A C G T
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AACCACAACC--
GGCCACACCCAN
 G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C A C G T A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AACCACAACC-
GGCCACACCCA
 G T C A T G C A A T G C G T A C G T C A T A G C G C T A C G T A A G T C G A T C A C G T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A