Information for 9-CGGCTGCCGG (Motif 16)

A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C G T A C A C T G A C T G A G T C C G T A A C T G A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.152e+01
Information Content per bp:1.960
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif202.5
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets51.6 +/- 25.3bp
Average Position of motif in Background53.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELK4/MA0076.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGCTGCCGG-
CCACTTCCGGC
 A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G A C G T
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

Gabpa/MA0062.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGCCGG
NCCACTTCCGG
 A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCCGG
AGCAGCTGCTNN
 A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGCTGCCGG--
--ACTTCCGGNT
 A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G A C G T A C G T
A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCCGG
AGCAGCTGCT--
 A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTGCCGG
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGCCGG
NCAGCTGCTG-
 A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGGCTGCCGG--
--ACTTCCGGTN
 A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G A C G T A C G T
A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGCCGG
NNACAGCTGC---
 A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGCTGCCGG--
--ACTTCCGGTT
 A G T C A C T G A C T G G T A C A C G T A C T G A G T C A G T C A C T G A C T G A C G T A C G T
A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T