Information for 4-ATGCCGGCCMCTTTGG (Motif 9)

C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G
Reverse Opposite:
G T A C A T G C C G T A C T G A C G T A A C T G A C T G T A C G A C T G A G T C G A T C T A C G C A T G A T G C G T C A A G C T
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.728
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.7 +/- 19.1bp
Average Position of motif in Background54.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG-
---------CCTTTGTT
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG
----AGGVNCCTTTGT
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.57
Offset:10
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG
----------CTTTGT
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.57
Offset:9
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG-
---------CCWTTGTY
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG-----
----TGTTCCCATTGTGTACT
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.56
Offset:9
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG---
---------CCWTTGTYYB
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG---
---------YCTTTGTTCC
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG--
--------NCCATTGTTC
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGCCGGCCMCTTTGG
GGTCCCGCCCCCTTCTC
 A C G T C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATGCCGGCCMCTTTGG
---GCGACCACACTG-
 C T G A A C G T A T C G G A T C A G T C C A T G T A C G G T A C A T G C T G A C A G T C C G A T A G C T A C G T A T C G C A T G
A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T