Information for 5-GGATTGTTGG (Motif 11)

T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G
Reverse Opposite:
T A G C G T A C C T G A C T G A A T G C C G T A C T G A A G C T A T G C A G T C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.832
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif323.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets47.7 +/- 27.8bp
Average Position of motif in Background49.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GGATTGTTGG
--ATTGTTA-
 T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGATTGTTGG
--ATTGTT--
 T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGATTGTTGG
CCATTGTTNY
 T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGATTGTTGG---
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGATTGTTGG-
--ATTGTTTAN
 T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGATTGTTGG----
TTCAATTGTTCTAAAA
 A C G T A C G T T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGATTGTTGG----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATTGTTGG
TTTGATTGATGN
 A C G T A C G T T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGATTGTTGG---
-GAATGTTTGTTT
 T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T A C G T A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGATTGTTGG----
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T T C A G A T C G T C G A A G C T A C G T A T C G A G C T A G C T A C T G A T C G A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A