Information for 11-TGSCTTTTCTGGC (Motif 15)

G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A T C G C T G A C G T A C G T A C G T A C A T G T A G C A G T C C T G A
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.786
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif38.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.6 +/- 21.6bp
Average Position of motif in Background42.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC--
----TTTTATGGCTN
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC---
NGANTTTTATGGCTCN
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC
---NTTTTATGAC
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC
----TTTTATTGC
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGSCTTTTCTGGC-
--CCTTTTATAGNC
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC-
----TTTAATTGCN
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC
---NTTTTATTGG
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC-
----TTTTATTRGN
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGSCTTTTCTGGC---
ANTAATTTTATGGCCGN
 A C G T G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGSCTTTTCTGGC
-NCCTTATCTG--
 G A C T A C T G A T C G G A T C A C G T A C G T A C G T A G C T A T G C A C G T C T A G A C T G A T G C
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T