p-value: | 1e-10 |
log p-value: | -2.336e+01 |
Information Content per bp: | 1.823 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.18% |
Number of Background Sequences with motif | 26.3 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 46.5 +/- 17.6bp |
Average Position of motif in Background | 51.3 +/- 23.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCGTCTCGC -CTGTCTGG- |
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ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCGTCTCGC GCTCGGSCTC-- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCCGTCTCGC VBSYGTCTGG- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCGTCTCGC---- -CTGTCTGTCACCT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCCGTCTCGC---- NNTNNTGTCTGGNNTNG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCCGTCTCGC---- --TGTCTGDCACCT |
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ZBTB33/MA0527.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCCGTCTCGC-------- ---CTCTCGCGAGATCTG |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCGTCTCGC----- NTNNCGTATCCAAGTNN |
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IRF8/MA0652.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCCGTCTCGC AGTTTCGGTTTCGN |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCCGTCTCGC-- --GGTCTGGCAT |
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