Information for 8-GCTGCTATGCTGT (Motif 11)

A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T
Reverse Opposite:
G T C A A G T C G T C A C T A G G T A C G T C A A C G T C T G A C A T G G T A C G T C A A C T G A G T C
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.774
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets60.0 +/- 25.0bp
Average Position of motif in Background56.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:GCTGCTATGCTGT-
--------GCTGTG
 A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTATGCTGT
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTATGCTGT
NCCGTTGCTANGNGN-
 A C G T A C G T A C G T A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGCTATGCTGT-------
---AAGACGCTGTAAAGCGA
 A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGCTATGCTGT-------
---AAGACGCTGTAAAGCGA
 A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGCTATGCTGT----
--NNTCCTGCTGTGNNN
 A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGCTATGCTGT-------
---AGGACGCTGTAAAGGGA
 A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTATGCTGT
GTNTTGTTGTGANNT
 A C G T A C G T A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTATGCTGT
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTATGCTGT-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C T G G T A C A C G T A C T G G T A C A G C T T C G A A C G T A C T G A G T C A C G T C T A G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T