Information for 6-GGTTAAGTAGGCA (Motif 11)

A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T C G T A G C T A A G T C A G T C
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 24.3bp
Average Position of motif in Background30.8 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAAGTAGGCA--
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

LBX1/MA0618.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGTTAAGTAGGCA
--TTAATTAG---
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAAGTAGGCA--
NTNNTTAAGTGGTTANN
 A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTTAAGTAGGCA-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTTAAGTAGGCA
AATTAATTAGT--
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTTAAGTAGGCA
-GTTAACTAGN--
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTTAAGTAGGCA
--TTAAGTGGT--
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTTAAGTAGGCA
--TTAAGTGGN--
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTTAAGTAGGCA----
-NGTAGGTTGGCATNNN
 A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGTTAAGTAGGCA
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A A C T G G C A T C G T A A C T G A C T G A G T C C G T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A