Information for 1-GAAGATGGCGGAC (Motif 1)

A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C
Reverse Opposite:
A T C G A C G T G T A C A G T C A C T G T A G C A G T C C G T A A G C T A G T C A C G T A C G T A T G C
p-value:1e-17
log p-value:-4.108e+01
Information Content per bp:1.773
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif148.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets44.2 +/- 28.1bp
Average Position of motif in Background53.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GAAGATGGCGGAC
CAAGATGGCGGC-
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GAAGATGGCGGAC
CAAGATGGCGGC-
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GAAGATGGCGGAC
--TAATGGCGGNC
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGATGGCGGAC
AACAGATGGC----
 A C G T A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAGATGGCGGAC----
NAGANTGGCGGGGNGNA
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAGATGGCGGAC-
--AGGTGHCAGACA
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAGATGGCGGAC--
--AGGTGNCAGACAG
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAGATGGCGGAC--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAGATGGCGGAC-
--RGKGGGCGGAGC
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAAGATGGCGGAC----
-----NCGCGGACGTTG
 A T C G C G T A T G C A T C A G C T G A A C G T A C T G A C T G G T A C C T A G C A T G G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G