Information for 3-GGGAATCCACCAG (Motif 9)

A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A T C G C G A T A C T G A C T G C G T A A C G T A C G T A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 20.8bp
Average Position of motif in Background17.1 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCACCAG
GGGGGAATCCCC---
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCACCAG
GGAAATCCCC---
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGAATCCACCAG
-SSAATCCACANN
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCACCAG
AGGGGATTCCCCT--
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCACCAG
AGGGGAATCCCCT--
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCACCAG
GGGAAATCCCCN-
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAATCCACCAG
TCCAATCCACA--
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCACCAG
GGAAATTCCC---
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGGAATCCACCAG
----ATCCAC---
 A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCACCAG
CCWGGAATGY-----
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T