Information for 1-SGARMRAYCCTGGCWG (Motif 5)

A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C T G C T A G A C G T A G C T A C G T A G T C A G C T G T A C A T C G
p-value:1e-13
log p-value:-3.005e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.8 +/- 24.9bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:SGARMRAYCCTGGCWG
--------CTTGGCAA
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:SGARMRAYCCTGGCWG
---------TTGGCA-
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:SGARMRAYCCTGGCWG-
--------NTTGGCANN
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:SGARMRAYCCTGGCWG
----ACATCCTGNT--
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:SGARMRAYCCTGGCWG
-------TNNGGGCAG
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:SGARMRAYCCTGGCWG-------
---------CTGGCAGNCTGCCA
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:SGARMRAYCCTGGCWG---
---CAATCACTGGCAGAAT
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:SGARMRAYCCTGGCWG
---AAGACCCYYN---
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:SGARMRAYCCTGGCWG--
--------VBTGWCAGCB
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:SGARMRAYCCTGGCWG
GGAAATCCCC------
 A T G C A C T G C T G A C T A G G T C A C T G A G T C A G A T C A G T C A G T C A C G T A C T G A C T G A G T C C G A T A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T