Information for 2-TCGCCATCTT (Motif 2)

A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T
Reverse Opposite:
C G T A G T C A A T C G C G T A A G C T A C T G A C T G A T G C C T A G T C G A
p-value:1e-16
log p-value:-3.725e+01
Information Content per bp:1.845
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif199.3
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets45.2 +/- 24.7bp
Average Position of motif in Background52.2 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TCGCCATCTT-
GCCGCCATCTTG
 A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TCGCCATCTT-
GCNGCCATCTTG
 A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TCGCCATCTT
GTCCGCCATTA-
 A C G T A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCGCCATCTT--
--GCCATCTGTT
 A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TCGCCATCTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCGCCATCTT--
--ACCATCTGTT
 A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCATCTT
ACGTCATC--
 A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TCGCCATCTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCGCCATCTT---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGCCATCTT
CGTGCCAAG--
 A C G T A G C T A G T C A T C G A G T C A G T C C T G A C G A T A T G C C A G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T