Information for 4-CGCGTCTACGCAGTGC (Motif 17)

A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
Reverse Opposite:
C T A G T A G C C G T A A T G C A C G T C A T G G T A C A T C G A G C T G T C A A C T G T G C A A T G C T A C G A T G C T A C G
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.662
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif293.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets46.7 +/- 21.9bp
Average Position of motif in Background46.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCGTCTACGCAGTGC
-GCGCATGCGCAG---
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCGTCTACGCAGTGC
-GCGCCTGCGCA----
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGCGTCTACGCAGTGC--
----GCCGCGCAGTGCGT
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCGTCTACGCAGTGC
-GCGCATGCGCAC---
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGCGTCTACGCAGTGC----
---NNNANTGCAGTGCNNTT
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGCGTCTACGCAGTGC
CGCAGCTGCG------
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCGTCTACGCAGTGC-------
------CGAACAGTGCTCACTAT
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGCGTCTACGCAGTGC
-ACGCCCACGCA----
 A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCTACGCAGTGC
CTACGCCCACGCACT--
 A C G T A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCTACGCAGTGC
VBSYGTCTGG-------
 A C G T A T G C T A C G A T G C A T C G A C G T A G T C A C G T T C G A A T G C A C T G G T A C G T C A T A C G G C A T A T C G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T