Information for 7-GACGAGACGA (Motif 13)

A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
Reverse Opposite:
A C G T G T A C T C A G A C G T A T G C A G C T A G T C A T C G A C G T A G T C
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif37.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.4 +/- 24.1bp
Average Position of motif in Background48.2 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GACGAGACGA
CGGTGACGTCAC--
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACGAGACGA
TGACGTCA---
 A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACGAGACGA
TGTCTAGACG-
 A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACGAGACGA--
AAGATAAGATAACA
 A C G T A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GACGAGACGA
--CCAGACAG
 A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACGAGACGA----
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACGAGACGA
NCACGTGACN-
 A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACGAGACGA
GTCACGTGAC--
 A C G T A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GACGAGACGA--
--CCAGACRSVB
 A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GACGAGACGA
TGACGT-----
 A C G T A C T G C G T A A T G C A C T G C T G A A T C G C G T A A G T C C A T G G T C A
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T