Information for 6-CGAGAGAGCGGCT (Motif 12)

A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
Reverse Opposite:
T C G A A C T G A T G C A G T C A C T G A G T C A G C T T A G C A G C T A G T C A C G T A T G C A T C G
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.797
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif81.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets41.4 +/- 26.1bp
Average Position of motif in Background47.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGAGAGAGCGGCT
CAAGATGGCGGC-
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGAGAGAGCGGCT
CAAGATGGCGGC-
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGAGAGAGCGGCT---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGAGAGAGCGGCT--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGAGAGAGCGGCT
ANTGCGGGGGCGGN-
 A C G T A C G T A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGAGAGAGCGGCT
--DGGGYGKGGC-
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGAGAGAGCGGCT
--TGGGTGGGGC-
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGAGAGAGCGGCT
--GGGGNGGGGC-
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGAGAGAGCGGCT-
GGCGGGGGCGGGGG
 A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGAGCGGCT
NNNACCGAGAGTNNN---
 A C G T A C G T A C G T A C G T A C G T A T G C T A C G C G T A A C T G T C G A A C T G T C G A A C T G A G T C A C T G A T C G A G T C A G C T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T