Information for 5-GVAAAGTTCCCCA (Motif 11)

A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A T C G T A C G C T G A C G T A A G T C C G A T A C G T A C G T A T C G A G T C
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.0 +/- 31.2bp
Average Position of motif in Background50.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GVAAAGTTCCCCA
GGAAATTCCC---
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GVAAAGTTCCCCA
GGAAATTCCC---
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GVAAAGTTCCCCA
-------TCCCCA
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GVAAAGTTCCCCA
GGAAANCCCC---
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GVAAAGTTCCCCA
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GVAAAGTTCCCCA
GGAAATCCCC---
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GVAAAGTTCCCCA---
--NNACTTCCTCTTNN
 A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GVAAAGTTCCCCA
TGGAATGT------
 A C G T A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GVAAAGTTCCCCA-
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GVAAAGTTCCCCA
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A A C T G A C G T A G C T A G T C A T G C A G T C A G T C C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T