Information for 5-CAGTCCTGCGTGA (Motif 8)

A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A A G T C A C T G A G T C C G T A A C T G A C T G G T C A A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 25.2bp
Average Position of motif in Background36.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX9/MA0781.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCCTGCGTGA--
TGCAGTCATGCGTGACG
 A C G T A C G T A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCCTGCGTGA--
NGCANTCATGCGTGACG
 A C G T A C G T A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

Pax6/MA0069.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGTCCTGCGTGA-
AANTCATGCGTGAA
 A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTCCTGCGTGA--
GCAGCCAAGCGTGACN
 A C G T A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCTGCGTGA-
SCAGYCADGCATGAC
 A C G T A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAGTCCTGCGTGA
------TGCGTG-
 A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTCCTGCGTGA----
--NTGCTGAGTCATCCN
 A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGTCCTGCGTGA
---TGCTGAGTCA
 A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A
A C G T A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAGTCCTGCGTGA
------TGAGTCA
 A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCCTGCGTGA-
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C G T G T A C G T A C A C G T A C T G T G A C A C T G A C G T A T C G C G T A A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C