Information for 2-AGCGHAGGGHGGGCTG (Motif 5)

C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A G T C A G T C A G T C C T A G A G T C A G T C A G T C A C G T C A T G A G T C C A T G A G T C A C G T
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 16.3bp
Average Position of motif in Background73.3 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG
-----------NGCTN
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG--
--NATNGGGNGGGGANAN
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.50
Offset:9
Orientation:forward strand
Alignment:AGCGHAGGGHGGGCTG-
---------TWGTCTGV
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG--
--NNAGGGGCGGGGTNNA
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG-
NNTNNGGGGCGGNGNGN
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG-----
------GGNGCGNCTGTTNNN
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG
-----GGGGNGGGGC-
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.49
Offset:12
Orientation:forward strand
Alignment:AGCGHAGGGHGGGCTG--
------------GCTGTG
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGCGHAGGGHGGGCTG
GGGNGGGGGCGGGGC-
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGCGHAGGGHGGGCTG--
-GTATTGGGTGGGTAATT
 C G T A C T A G G T A C A C T G G A T C C G T A C T A G A C T G A C T G G A C T C T A G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T