Information for 22-GCAGAAGATGGCG (Motif 38)

A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
Reverse Opposite:
A G T C A T C G G T A C A G T C G T C A A C G T G T A C A G C T C G A T A G T C A G C T A C T G A G T C
p-value:1e-6
log p-value:-1.584e+01
Information Content per bp:1.728
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif456.6
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets59.5 +/- 24.9bp
Average Position of motif in Background51.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCAGAAGATGGCG--
---CAAGATGGCGGC
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGAAGATGGCG
NNNNGGGGGAAGANGG--
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCAGAAGATGGCG--
---CAAGATGGCGGC
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCAGAAGATGGCG---
-----TAATGGCGGNC
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGAAGATGGCG
GCTAAAAATAGC-
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCAGAAGATGGCG
--NGAAGC-----
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGAAGATGGCG
AGCGGAAGTG----
 A C G T A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCAGAAGATGGCG--------
---AAAAATGGCGCCATTTTT
 A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAAGATGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCAGAAGATGGCG
AGAGGAA-------
 A C G T A C T G T G A C T C G A C T A G C G T A C T G A C A T G T G C A A C G T C T A G A C T G T A G C A C T G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T