Information for 11-GGCTCCGCTCTCCCYA (Motif 29)

A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
Reverse Opposite:
A G C T C T A G T A C G C T A G A T C G C G T A A C T G T G C A C T A G A T G C C T A G A T C G C T G A A C T G A T G C G T A C
p-value:1e-7
log p-value:-1.765e+01
Information Content per bp:1.755
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif105.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets55.9 +/- 28.1bp
Average Position of motif in Background47.2 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCTCCGCTCTCCCYA
-GCTCCGCCCMCY---
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCTCCGCTCTCCCYA
GGCCCCGCCCCC----
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCTCCGCTCTCCCYA
NRGCCCCRCCCHBNN--
 A C G T A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCTCCGCTCTCCCYA
-GCTCCG---------
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCTCCGCTCTCCCYA
-GCCMCGCCCMCY---
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCGCTCTCCCYA
GGTCCCGCCC------
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCCGCTCTCCCYA
NAGCCCCGCCCCCN---
 A C G T A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTCCGCTCTCCCYA
-GCCCCGCCCCCTCCC
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTCCGCTCTCCCYA
-GCCCCGCCCC-----
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCTCCGCTCTCCCYA
-GCCCCACCCA-----
 A C T G A T C G G T A C A G C T A T G C A G T C A T C G A G T C A C G T A G T C C G A T A T G C A G T C A G T C A G T C T C G A
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T