Information for 5-TAATGTGTTA (Motif 12)

C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A
Reverse Opposite:
C G A T T G C A C G T A G A T C C G T A G T A C C G T A A C G T A C G T C G T A
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.858
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets66.8 +/- 21.8bp
Average Position of motif in Background48.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TAATGTGTTA-
-AAGGTGTKAA
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAATGTGTTA--
--AGGTGTGAAM
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTGTTA
NTAATGAGCT-
 A C G T C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAATGTGTTA--
-AAGGTGTGAAA
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

NOTO/MA0710.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATGTGTTA
NNTAATTAGN--
 A C G T A C G T C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATGTGTTA
NNTAATTANN--
 A C G T A C G T C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAATGTGTTA
--AGGTGTGA
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAATGTGTTA-
-AAGGTGTGAA
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTGTTA--
TTAATGTTTAACC
 A C G T C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAATGTGTTA----
-AAGGTGTGAAAAT
 C G A T C G T A C G T A A C G T A C T G A C G T C T A G C G A T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T