Information for 4-TGTGTATTTTGGC (Motif 3)

A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A C T G A C G T A C T G A A G C T C G T A T A G C C T G A A G T C C G T A
p-value:1e-15
log p-value:-3.603e+01
Information Content per bp:1.825
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.7 +/- 22.8bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TGTGTATTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTGTATTTTGGC
TGTTTACTTAGG-
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:8
Orientation:forward strand
Alignment:TGTGTATTTTGGC-
--------TTGGCA
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTGTATTTTGGC
TGTTTATTT----
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TGTGTATTTTGGC---
-------NTTGGCANN
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGTATTTTGGC
TGTTTACTTT---
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGTATTTTGGC
TGTTTACTTT---
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTGTATTTTGGC
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGTATTTTGGC
TGTGGATTNNN--
 A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTGTATTTTGGC
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T T C A G A G C T A C T G A C G T C T G A A G C T A C G T A G C T A C G T A C T G A C T G G T A C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T