Information for 6-TTATTAGCTC (Motif 11)

G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C
Reverse Opposite:
T A C G C G T A A C T G A G T C C G A T G T C A G T C A A C G T C G T A C G T A
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.766
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif66.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets29.4 +/- 22.8bp
Average Position of motif in Background57.5 +/- 41.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTATTAGCTC
NTAATGAGCT-
 A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTATTAGCTC--
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0058.1_Hoxb3/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TTATTAGCTC-
TNNNACTAATTAGNTCA
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PB0031.1_Hoxa3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTATTAGCTC--
GTTAATTANCTCNN
 A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

PH0074.1_Hoxd1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTATTAGCTC--
TAAACTAATTAGCTGTA
 A C G T A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PH0081.1_Pdx1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTATTAGCTC--
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTATTAGCTC--
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTATTAGCTC--
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TTATTAGCTC
-----NGCTN
 G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Hoxb5/MA0904.1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTATTAGCTC--
ACGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T G C A T G C A T T G C A A C G T C A G T C G T A A C T G A G T C A C G T A T G C A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T