p-value: | 1e-5 |
log p-value: | -1.337e+01 |
Information Content per bp: | 1.856 |
Number of Target Sequences with motif | 34.0 |
Percentage of Target Sequences with motif | 3.82% |
Number of Background Sequences with motif | 643.2 |
Percentage of Background Sequences with motif | 1.51% |
Average Position of motif in Targets | 50.3 +/- 29.7bp |
Average Position of motif in Background | 48.4 +/- 42.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TACAGCGGGR-- CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACAGCGGGR---- DCHCAGCAGGRGGCC |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACAGCGGGR-- GAGCACAGCAGGACA |
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Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TACAGCGGGR NAACAGCTGG- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACAGCGGGR-- CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACAGCGGGR DCTCAGCAGG- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACAGCGGGR---- CACAGCGGGGGGTC |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACAGCGGGR-- CCACACAGCAGGAGA |
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Rhox11/MA0629.1/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TACAGCGGGR- TCNNTTTACAGCGNNNT |
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PH0157.1_Rhox11_1/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TACAGCGGGR- TCNNTTTACAGCGNNNT |
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