Information for 7-CTGCGGGGAGATG (Motif 4)

G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A C G T A T G C A G T C A G T C A G T C C A T G A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 19.1bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGGGAGATG
TATGCGGGTA----
 A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCGGGGAGATG
-TNNGGGCAG---
 G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGCGGGGAGATG
---TGGGGA----
 G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGGGAGATG
CATGCGGGTAC---
 A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGGGGAGATG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGCGGGGAGATG------
--AAGGCCAGATGGTCCGG
 G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGGGGAGATG
RGSMTBCTGGGAAAT-
 A C G T A C G T A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGGGGAGATG-----
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTGCGGGGAGATG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGCGGGGAGATG
GGGCGGGAAGG--
 G T A C A C G T A C T G G A T C A C T G A C T G A C T G A T C G C G T A A C T G C G T A A C G T A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T