Information for 13-GCAGCGGCTGGRG (Motif 12)

A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C A G T C C G T A A C T G A T G C G A T C A T C G A G T C G C A T A T C G A G T C
p-value:1e-1
log p-value:-3.875e+00
Information Content per bp:1.838
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCGGCTGGRG
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCGGCTGGRG
AGCAGCTGCT----
 A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCAGCGGCTGGRG
-CAGCAGCTGN--
 A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGCGGCTGGRG
AGCAGCTGCTNN--
 A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGCGGCTGGRG
CGCAGCTGCG----
 A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCAGCGGCTGGRG--
---GRTGMTRGAGCC
 A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCGGCTGGRG
GGCGGGGGCGGGGG
 A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGGCTGGRG
GGGNGGGGGCGGGGC
 A C G T A C G T A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAGCGGCTGGRG-
--RGKGGGCGGAGC
 A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAGCGGCTGGRG
-NAACAGCTGG--
 A C T G A T G C C G T A A C T G T A G C C T A G A T C G A G T C C G A T A C T G A C T G C T A G C T A G
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T