Information for 7-ACATATTGAT (Motif 10)

C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C T G C A C G T A A C G T C G T A A C G T A C T G G C A T
p-value:1e-5
log p-value:-1.246e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.8 +/- 25.7bp
Average Position of motif in Background59.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ACATATTGAT
ACCATATGGT-
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACATATTGAT--
--NTATYGATCH
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACATATTGAT
ACATATGG--
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACATATTGAT
NACATATGGN-
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:ACATATTGAT----
----ATTGATTYND
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACATATTGAT--
--NTATCGATTA
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACATATTGAT--
--TTATCGATTA
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACATATTGAT
GHATATKCAT
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACATATTGAT
GAATATTCAT
 C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACATATTGAT
AACAKATGGY-
 A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C G T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T