Homer de novo Motif Results (hs_Tumor_H128_undef_ASCL1_SRX1044120_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 907
Total background sequences = 42629
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A G T C C G T A A T C G A T G C C G A T A C T G A T G C G A T C A T G C A G T C A G T C C T A G 1e-435-1.003e+0381.70%15.03%21.8bp (41.1bp)HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A A C T G A T G C A C G T A C T G C T G A C T A G A G T C C G T A C G T A C T G A A G T C C T G A 1e-28-6.589e+012.98%0.11%20.6bp (38.4bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.789)
More Information | Similar Motifs Found
motif file (matrix)
3 G T C A T C G A C G T A T C A G A G C T T C G A T G C A C T G A G A C T T C G A 1e-15-3.629e+0112.02%5.06%28.0bp (35.2bp)FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer(0.888)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C G A T C G T A C A T G C A G T C A C G T A C T G A T G C A G T C C G T A A C T G A T C G A G T C 1e-14-3.343e+012.65%0.30%24.8bp (38.0bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G A G T C G T C A C T G A A C G T A C G T C G T A A C T G G T C A T A G C 1e-13-3.195e+011.21%0.03%29.4bp (17.6bp)Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer(0.834)
More Information | Similar Motifs Found
motif file (matrix)
6 C G A T C T G A C G T A C G T A G A T C G C T A C G T A C G T A C G A T T C G A A G C T A G C T A C G T T G C A G T A C A G T C 1e-13-3.069e+010.77%0.01%26.7bp (20.4bp)PB0016.1_Foxj1_1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
7 C G T A A C G T A C G T A C T G T G A C A C G T A C G T A C G T C G T A C T A G A G T C A T C G A C G T 1e-12-2.972e+010.66%0.00%32.5bp (0.0bp)Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer(0.692)
More Information | Similar Motifs Found
motif file (matrix)
8 A C T G A C T G A G T C C T A G A C T G A C T G A C G T A C T G C T G A C G T A A C T G C G T A A T C G 1e-12-2.866e+010.88%0.01%22.8bp (5.4bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.613)
More Information | Similar Motifs Found
motif file (matrix)
9 A G T C A G T C A C G T A C T G C G A T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A T C G 1e-12-2.789e+010.99%0.02%20.5bp (16.6bp)Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer(0.748)
More Information | Similar Motifs Found
motif file (matrix)
10 * C A G T A G C T C G T A C T A G G T C A G A T C C G T A G C T A C G A T T C G A 1e-11-2.759e+014.19%1.03%24.2bp (33.0bp)Sox17/MA0078.1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G A T G T A C G T A C G T A C C T G A A T G C A C G T C A G T C T A G A T C G 1e-10-2.435e+014.85%1.50%31.6bp (33.5bp)n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T C G T A A T G C A C G T C G A T A G T C G T C A G T C A C G T A A C G T C T G A C G T A A C G T 1e-10-2.407e+010.55%0.00%18.8bp (0.8bp)MF0010.1_Homeobox_class/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
13 * C A G T A C T G C G T A C T G A C T G A A T G C G T A C A C G T A C T G G T C A 1e-10-2.399e+012.21%0.32%24.8bp (39.8bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.807)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T C T A G A C G T A C G T A C G T A C T G C G A T A C G T A C T G A G C T 1e-8-2.006e+010.88%0.04%28.1bp (33.5bp)Foxd3/MA0041.1/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
15 * C T A G G T A C A C G T A C T G G T C A A C T G C G T A C T G A T C A G G A C T 1e-8-1.996e+012.43%0.49%29.8bp (38.6bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
16 * T A C G C T A G C T G A A G C T A C T G C G T A C T A G A C T G A C G T A G T C G T A C A C G T C T A G A T C G C G T A A C T G 1e-8-1.860e+010.44%0.00%17.1bp (0.0bp)c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.602)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G A C G T C T A G A G T C A C G T A C G T A T G C A T G C A C G T A C T G 1e-7-1.707e+011.65%0.27%26.6bp (31.4bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.787)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G C G T A A C T G G T A C A G T C C G T A A C T G A G T C A C G T A G T C A G C T C G T A G T A C 1e-7-1.682e+010.77%0.04%20.8bp (33.3bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T G C A G C T A T G C G T A C A G C T G T A C A C G T A T C G C G A T A G C T G T A C C G A T A T C G 1e-6-1.455e+010.88%0.07%23.7bp (35.0bp)ZEB1/MA0103.2/Jaspar(0.610)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T C G A T A C G T C A G T C A G T C A G T A C G T C G A T C G T A C G T A C G T A G T C A G T C A 1e-4-1.130e+010.33%0.01%17.3bp (17.3bp)PB0182.1_Srf_2/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T C T A G A C T G C G T A A C G T A C T G C G T A A C T G C T A G A C G T 1e-4-9.949e+000.44%0.02%30.2bp (13.9bp)Atf3/MA0605.1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)