Information for 3-TCCCTAVAGCTTCCCC (Motif 4)

C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
Reverse Opposite:
C A T G A C T G A C T G A T C G C T G A G T C A A C T G A T G C A C G T A C T G A C G T C G T A A C T G A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.801
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 26.6bp
Average Position of motif in Background52.2 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCCCTAVAGCTTCCCC-----
-CCCCAAACCACCCCCCCCCA
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TCCCTAVAGCTTCCCC
-----CAAGCTT----
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TCCCTAVAGCTTCCCC-
-----KGCCCTTCCCCA
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TCCCTAVAGCTTCCCC
--------GCTTCC--
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:TCCCTAVAGCTTCCCC-
-----------TCCCCA
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTAVAGCTTCCCC
NNGGCGACACCTCNNN-
 A C G T C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TCCCTAVAGCTTCCCC-----
-----CCGTCTTCCCCCTCAC
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TCCCTAVAGCTTCCCC
--ACTACAATTCCC--
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---TCCCTAVAGCTTCCCC
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:TCCCTAVAGCTTCCCC----
------NNACTTCCTCTTNN
 C G A T A G T C A G T C A G T C G C A T G T C A T A G C C G T A A T C G G T A C A C G T A G C T A T G C A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A