Information for 4-RAAAGAYACAAAK (Motif 7)

C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G
Reverse Opposite:
G T A C A C G T A G C T C G A T A C T G A C G T C T A G A C G T A T G C A C G T A C G T A C G T A G T C
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 20.0bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:RAAAGAYACAAAK----
-AAACAGACAAAGGAAT
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:RAAAGAYACAAAK-
----AAAACAAAGG
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:RAAAGAYACAAAK
-------ACAAAG
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RAAAGAYACAAAK
-AAACAAACATTC
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RAAAGAYACAAAK-
----VRRACAAWGG
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--RAAAGAYACAAAK
CAAAAGTAAACAAAG
 A C G T A C G T C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RAAAGAYACAAAK-
----GGAACAAAGR
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAAAGAYACAAAK-----
-AGAAGAACAAAGGACTA
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RAAAGAYACAAAK-
----RNAACAATGG
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:RAAAGAYACAAAK------
-------ACAAAGGNBCCT
 C T A G C G T A C G T A C G T A A T C G C G T A G A C T C G T A A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T