Information for 3-AATTKCAGTCTCC (Motif 6)

C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A C T A G C G T A A G T C C G A T C T A G G T C A C G T A C G T A A C G T A G C T
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.833
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 26.7bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATTKCAGTCTCC
AGTTTCAGTTTC-
 C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATTKCAGTCTCC
ACTTTCACTTTC-
 C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTKCAGTCTCC
TCAGTTTCATTTTCC
 A C G T A C G T C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATTKCAGTCTCC
AGTTTCAKTTTC-
 C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATTKCAGTCTCC
AACAATTTCAGTGTT-
 A C G T A C G T A C G T C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATTKCAGTCTCC-
AGTTTCGGTTTCGN
 C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATTKCAGTCTCC
RSTTTCRSTTTC-
 C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATTKCAGTCTCC
GAACAATTGCAGTGTT-
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATTKCAGTCTCC----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATTKCAGTCTCC
TNGAATTTCATTNAN-
 A C G T A C G T A C G T C T G A G T C A A C G T A C G T A C G T A G T C C G T A A C T G G A C T A G T C A C G T A G T C G T A C
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T