Information for 2-TCAATAATGT (Motif 5)

A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A C G T A C G T C G T A A G C T A C G T C A T G T C G A
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.862
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 23.3bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TCAATAATGT--
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCAATAATGT
--AATAATT-
 A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCAATAATGT--
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCAATAATGT
-CACTAATT-
 A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCAATAATGT--
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCAATAATGT
-NAACAAT--
 A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAATAATGT
NTAATTAATAT
 A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCAATAATGT--
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

POU4F1/MA0790.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCAATAATGT--
CATTAATTATTCAT
 A C G T A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAATAATGT
ATGAATATTC-
 A C G T A C G T G A T C G T C A C T G A A C G T C G T A C G T A A C G T A T C G A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T