Information for 3-AGGCGAGTTC (Motif 16)

C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A G C T A G T C C T A G A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.926
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.3 +/- 20.5bp
Average Position of motif in Background54.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGGCGAGTTC
AAGGCAAGTGT
 A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCGAGTTC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGCGAGTTC
-GGCGCGCT-
 C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGAGTTC
CAGGTGAGG--
 A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCGAGTTC--
NGGGGATTTCCC
 C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCGAGTTC
CAGGTAAGTAT
 A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGCGAGTTC--
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGCGAGTTC--
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGCGAGTTC
CATGCGGGTAC
 A C G T C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCGAGTTC-
-GGGGATTTCC
 C T G A A C T G A C T G A G T C A C T G C T G A A C T G A C G T A C G T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C