Information for 8-CAGCAGACACGGC (Motif 12)

A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
Reverse Opposite:
A C T G A T G C G A T C A T C G C G A T A C T G A G C T A G T C A C G T A C T G A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.796
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets37.2 +/- 19.1bp
Average Position of motif in Background61.3 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGACACGGC-
AGCGGCACACACGCAA
 A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACGGC
--CCAGACRSVB-
 A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACGGC
--CCAGACAG---
 A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCAGACACGGC
AGAGRRACAGCWGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACGGC
--BCAGACWA---
 A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGACACGGC
AGCAACAGCCGCACC
 A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGCAGACACGGC
NCGCGGACGTTG-
 A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGACACGGC
ANCAGCTG-------
 A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGACACGGC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGACACGGC
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C T G A A C T G G T A C T C G A C T A G T C G A A G T C C G T A A T G C C A T G A T C G A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T