Information for 7-YRGAAAGGAA (Motif 17)

A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A
Reverse Opposite:
A C G T G A C T T A G C A T G C C G A T A C G T A C G T A G T C G A T C T C G A
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.734
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif579.7
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets46.1 +/- 28.6bp
Average Position of motif in Background50.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:YRGAAAGGAA
---AGAGGAA
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:YRGAAAGGAA--
--AACAGGAAGT
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:YRGAAAGGAA---
---ACAGGAAGTG
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:YRGAAAGGAA--
--NACAGGAAAT
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YRGAAAGGAA--
--NACAGGAAAT
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:YRGAAAGGAA---
-AGAAACGAAAGT
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YRGAAAGGAA----
--NDCAGGAARTNN
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:YRGAAAGGAA
TTGACAGC--
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YRGAAAGGAA----
GAGAACCGAAACTG
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:YRGAAAGGAA---
---ACAGGAAGTG
 A G C T C T A G A C T G C G T A T G C A C G T A A T C G A T C G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G