Information for 3-GCTAGCGACA (Motif 7)

A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A
Reverse Opposite:
A G C T A C T G A C G T A G T C C T A G A G T C A G C T G C T A C T A G A T G C
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.859
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.7 +/- 30.7bp
Average Position of motif in Background51.5 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTAGCGACA-
SCCTAGCAACAG
 A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGCGACA-
GGTTAGAGACCT
 A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCTAGCGACA--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCTAGCGACA------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

ZBED1/MA0749.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTAGCGACA--
CTATCGCGACATA
 A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTAGCGACA--
TCTCGCGAGAAT
 A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTAGCGACA
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTAGCGACA--
----TTGACAGG
 A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTAGCGACA-
----TTGACAG
 A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTAGCGACA--
TACCATAGCAACGGT
 A C G T A C G T A C G T A T C G A G T C C G A T C T G A A C T G A G T C A C T G G T C A A G T C C T G A A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T